CDS

Accession Number TCMCG051C22982
gbkey CDS
Protein Id XP_024461445.1
Location complement(join(3528530..3529908,3533041..3533218))
Gene LOC112328231
GeneID 112328231
Organism Populus trichocarpa

Protein

Length 518aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024605677.1
Definition DNA-directed RNA polymerase II subunit RPB1-like [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description nitrate import
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005102        [VIEW IN EMBL-EBI]
GO:0005179        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006820        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006995        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010469        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0015698        [VIEW IN EMBL-EBI]
GO:0015706        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0030545        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0043562        [VIEW IN EMBL-EBI]
GO:0048018        [VIEW IN EMBL-EBI]
GO:0048046        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:1900618        [VIEW IN EMBL-EBI]
GO:1901371        [VIEW IN EMBL-EBI]
GO:1902025        [VIEW IN EMBL-EBI]
GO:1905421        [VIEW IN EMBL-EBI]
GO:2000024        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000280        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGCAGTAGAGGTAGGCTATAGTAAAGGAGCGGTAGGCAGGTTGGCAAGATTTTGGCCAGCATCTGATGGCAGTGGCCACAATAGGATAGAGGCAGAGGAAGAAACACCAACTAACTGCATTGGTGGCACGGCAGAGGAGGGGATCTGCACCGGAGGTGCAGTAAAAGGGAGAGGAAGGTCAATTAAGCAAACGAATAAGCAGGAACATGTTACCAATGAAATAGAGCCGCTAAAAGAAATGGCCAACCAAAGTACGAATACCAACTTGCACCACAACACTGCAAATAATCAAAAAGTTTCTCTCCCTTCACCCCCAGTTCACATTCCGACTGTTCACCATTCCAAGGCAGGCAGAAAAGAAATGACCCCTCCTATGGTCCCAAGCTTCAGCGGTTCTCCTGGTGTTAGGCATCCAAAGACACCGGGGGCTAACTCTGTCACTACTGTGAAAGATGATTTCAAACCCATAACATCTGGTCAGAGTCCTGGTGTTGGCCACAACAATGACAATTCTGTCACTGCTTTCAAAGATGATTTCCAACCCACAACACCAGGTAACAGTCCTGGAGTTGGCCATATTCTTGTAGATGAAGATGACAGTGAAGATGATGATCCAAAGGCACCTGGTACTAGCTCCAGTAATGAACGTTCTGGTGCAGCATTCAAACCCACAACACCAGGTCACAGCCCTGGCGTTGGCCATATGTCATCAGTAGATCAAAGTGATAAGACTGATCTAAAGGCATCCAAAACTGAACTTTCTGTCACAACACCAGGTCATAGTCCCGGGGTTGACCATACTCTTTCAGATGAAGATGAAGATGATAGTGAAGATGTTGATCCAAAGGCACCCGGTACTGGCTCCAGTATAAAACGTTCTGGTGCAGCATTCAAACCCACAACACCAGGTCATAGCCCTGGCATTGGCCATATGTCATCAGTAGATCAAAGTGATAAGATCGATTCAAAGGCATCCGAAATTGAACATTCTGTCACAACACCAGGTCATAGTTCCAGGGTTGGCCATATTCTTTCAGATGAAGATGCAGATGATAGTGAAGATGTTGATCCAAAGGCACCCGGTACTGGCTCCAGTATAAAACGTTCAAGTGCAGCATTCAAACCCACAACACCAGGTCACAGCCCTGGCATTGGCCATATGTCATCAGTAGATCAAAGTGATAAGATCGATTCAAAGGCATCCGAAATTGAACATTTTAACACTGAACATTCTGTCACAACACCAGGTCATAGTCCCGCGGTTGGCCATATTCTTTCAGATGAAGATGAAGATGATAATGAAGATGTTGATCCAAAGGCACCCGGTACTGGCTCCAGTATAAAACGTTCTGGTGCAGCATTTAAACCCACAACACCAGGTCACAGCCCTGGCATTGGCCATATGTCATCAGTAGATCAAAGTGATAAGACCGATCGAAAGGCAACCAACATTGAACATTCTGTCGCTAGAGTGCCAGATGGTTTCCGACCCGCGGTACCAATTCAGGGCCCTGGGGTTGGTCATGTTTTCCAAGCACAAACGAAGAACTAA
Protein:  
MAAVEVGYSKGAVGRLARFWPASDGSGHNRIEAEEETPTNCIGGTAEEGICTGGAVKGRGRSIKQTNKQEHVTNEIEPLKEMANQSTNTNLHHNTANNQKVSLPSPPVHIPTVHHSKAGRKEMTPPMVPSFSGSPGVRHPKTPGANSVTTVKDDFKPITSGQSPGVGHNNDNSVTAFKDDFQPTTPGNSPGVGHILVDEDDSEDDDPKAPGTSSSNERSGAAFKPTTPGHSPGVGHMSSVDQSDKTDLKASKTELSVTTPGHSPGVDHTLSDEDEDDSEDVDPKAPGTGSSIKRSGAAFKPTTPGHSPGIGHMSSVDQSDKIDSKASEIEHSVTTPGHSSRVGHILSDEDADDSEDVDPKAPGTGSSIKRSSAAFKPTTPGHSPGIGHMSSVDQSDKIDSKASEIEHFNTEHSVTTPGHSPAVGHILSDEDEDDNEDVDPKAPGTGSSIKRSGAAFKPTTPGHSPGIGHMSSVDQSDKTDRKATNIEHSVARVPDGFRPAVPIQGPGVGHVFQAQTKN